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Table 2 Gene expression fold-change differences in islets from BLKS mice compared with those from B6 mice

From: Pancreatic islet expression profiling in diabetes-prone C57BLKS/J mice reveals transcriptional differences contributed by DBA loci, including Plagl1 and Nnt

   

Interstrain fold difference (BLKS/B6)

   

Probe

Gene

Description

Low Gluc.

High Gluc.

Chromosome

Mb

Genetic Origin

A_51_P417251

6330403K07RIK

RIKEN cDNA

4.32

17.43

11

71.1

DBA

A_52_P532456

PLAGL1

pleiomorphic adenoma gene-like 1

2.93

7.15

10

12.8

DBA

A_51_P113395

NNT

nicotinamide nucleotide transhydrogenase

1.94

4.22

13

116.6

DBA

A_52_P395228

NNT

nicotinamide nucleotide transhydrogenase

2.01

4.07

13

116.6

DBA

A_51_P113399

NNT

nicotinamide nucleotide transhydrogenase

1.79

3.85

13

116.6

DBA

A_51_P422030

FLJ22709

hypothetical protein

1.99

3.82

8

69.8

DBA

A_51_P358765

SPP1

secreted phosphoprotein 1

2.46

3.76

5

103.6

B6

A_51_P253984

PCP4

Purkinje cell protein 4

1.93

3.52

16

96.9

DBA

A_51_P402943

S100A9

S100 calcium-binding protein A9

1.21

3.28

3

90.8

DBA

A_52_P542860

BTBD9

BTB domain-containing 9

1.99

3.27

17

28.7

DBA

A_51_P440682

CAP1

CAP, adenylate cyclase-associated protein 1

1.82

3.17

4

122.3

DBA

A_52_P3029

AGPAT4

1-acylglycerol-3-phosphate O-acyltransferase 4

1.42

2.92

17

10.9

DBA

A_51_P323620

THYN1

thymocyte nuclear protein 1

1.74

2.91

9

26.9

other

A_51_P346165

AGPAT4

1-acylglycerol-3-phosphate O-acyltransferase 4

1.42

2.89

17

10.9

DBA

A_51_P118417

SCPEP1

serine carboxypeptidase 1

1.70

2.87

11

89.0

DBA

A_51_P454873

NPY

neuropeptide Y

1.97

2.72

6

49.8

B6

A_51_P491017

GNPTG

N-acetylglucosamine-1-phosphate transferase, gamma subunit

1.82

2.71

17

23.4

DBA

A_52_P748882

ENO2

enolase 2

1.62

2.58

6

124.8

DBA

A_51_P167535

FABP3

fatty acid-binding protein 3

1.88

2.53

4

129.8

DBA?

A_51_P130028

ENO2

enolase 2

1.63

2.53

6

124.8

DBA

A_51_P101545

HGFAC

HGF activator

-1.92

-2.54

5

34.1

DBA

A_51_P337269

ALDOB

aldolase B, fructose-bisphosphate

-1.17

-2.66

4

49.6

B6

A_51_P215627

PLAC9

placenta-specific 9

-1.89

-2.67

14

23.6

DBA

A_52_P644774

ZZEF1

zinc finger, ZZ-type with EF-hand domain 1

-1.92

-2.73

11

73.0

DBA

A_51_P517075

SERPINF1

serpin peptidase inhibitor, clade F member 1

-1.50

-2.78

11

75.5

DBA

A_52_P213889

TMC7

transmembrane channel-like 7

-1.87

-2.83

7

114.5

DBA

A_52_P613498

4833420G17RIK

RIKEN cDNA

-2.04

-3.01

13

116.7

DBA

A_51_P376656

SYNPR

synaptoporin

-2.13

-3.08

14

11.4

DBA

A_52_P50496

HLA-A

major histocompatibility complex, class I, A

-2.23

-3.16

17

32.1

DBA

A_51_P509961

SLC5A10

solute carrier family 5 member 10

-1.21

-3.24

11

61.8

DBA

A_51_P246677

REC8L1

REC8-like 1

-2.28

-3.61

14

50.5

DBA

A_51_P392518

THUMPD1

THUMP domain-containing 1

-2.83

-4.30

7

115.6

DBA

A_51_P146560

MSLN

mesothelin

-2.31

-4.36

17

23.9

DBA

A_52_P137500

AK046255

Unknown cDNA

-2.70

-5.06

X

131.8

DBA

A_51_P443443

5830417I10RIK

RIKEN cDNA

-2.75

-5.46

3

89.0

DBA

A_52_P231729

H2-Q1

major histocompatibility complex Q1b

-8.74

-29.31

17

33.4

DBA

  1. Shown is the subset with fold change >2.5 under high glucose conditions (p < 0.001, Benjamini-Hochberg FDR 0.8). Genes are sorted by the interstrain fold difference in high glucose conditions.